PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN07827.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family B3
Protein Properties Length: 752aa    MW: 83073.2 Da    PI: 6.4045
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN07827.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B368.31e-21594691296
                 EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                 +kvl++sdv+++gr+vlpkk ae+h  +++ + ++ +t+ed  ++r+W+++++y  ++ks++y+l+ ++ +Fv+angL+egDf+v++  ++ +++++++
  KHN07827.1 594 QKVLKQSDVGSLGRIVLPKKEAETHlpELEARDGISITMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCGKYMI 689
                 79*************************999999********7778*********777777777777.********************..5669998887 PP

                 EE CS
          B3  95 kv 96 
                 + 
  KHN07827.1 690 RG 691
                 65 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.6E-29588701IPR015300DNA-binding pseudobarrel domain
CDDcd100151.66E-36591692No hitNo description
SuperFamilySSF1019369.42E-24592688IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.138593695IPR003340B3 DNA binding domain
SMARTSM010192.1E-22593695IPR003340B3 DNA binding domain
PfamPF023624.5E-18594690IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    Send to blast
MECEVELQGG DLHAGEVTDP NPIGFGNMED EHTLAVAERE MWLNSDQDEF LGVNDASMFY  60
ADFPPLPDFP CMSSSSSSSS ALPFPVKTMT CSTRTTTTTT TSSSSSSSSW AVLKSDAEED  120
AEKNHCNRYM HDQLDATLSS TASMEVSQQK NLDPGLGGPV GECMDDVMDT FGYMELLEAN  180
DFFDPASIFQ NEDNENPLVD FGTLEQHVPL HDEQHEMLHH QQGRTEEVDH QVPVCEEIQG  240
DEEGGDGVGV DDEMSNVFLE WLKSNKDSVS ANDLRNVKLK KATIESAARR LGGGKEAMKQ  300
LLKLILEWVQ TSHLQNKRRK ENNGSSISSA LQAQFPDPSV QNNQNTQSGS FSPESNACFN  360
NQTPWLSPQT FATDQAPLMV PPQQFQQPMV GYVGDPYTSG AASNNITTSH NHNSNNPYQP  420
GAEQYHMLES AHSWPHSQFN VACHYSQSFG DNNGIFPHGG FGGGYGNNQY PYQFFHGPGD  480
TLMRLGPSAT KEARKKRMAR QRRFLSHHRH HNGNHQNSGS DPHARLGGGD NCTTGLAAPH  540
HANPTANWMY WQAMTGGAAG PLGGRCGGSF GSPGRAASCG PGWKPEKNLR FLLQKVLKQS  600
DVGSLGRIVL PKKEAETHLP ELEARDGISI TMEDIGTSRV WNMRYRYWPN NKSRMYLLEN  660
TGDFVRANGL QEGDFIVIYS DVKCGKYMIR GVKVRQQGVK PETKKVGKSQ KNQHGTGTNA  720
STSGKMHQLQ LVLLLIMARH RHRKPKLKKV VN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB1644270.0AB164427.1 Psophocarpus tetragonolobus wbABI3 mRNA for ABI-3 homolog, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003552154.10.0PREDICTED: B3 domain-containing transcription factor ABI3-like isoform X2
SwissprotQ015931e-157ABI3_ARATH; B3 domain-containing transcription factor ABI3
TrEMBLA0A0B2PJT50.0A0A0B2PJT5_GLYSO; B3 domain-containing transcription factor ABI3
STRINGGLYMA18G38490.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF94483037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.11e-86B3 family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]